Protein Alignment Rpt4 and rpt-4

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001022113.1
• Gene: rpt-4 / 173384
• WormBaseID: WBGene00004504
• Length: 406
• Species: Caenorhabditis elegans
• Alignment Length: 394
• Identity: 319/394 - (80%)
• Similarity: 363/394 - (92%)
• Gaps: 0/394 - (0%)

  Fly     4 TATPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEV 68
            |...:.::.|.|||:.||:||.|.::||.:||:.|::..::||.:||||||:|:|||||||||||
 Worm    13 TGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEV 77

  Fly    69 LKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 133
            ||||:|:||||||||||||||||||.::|.:||.||||:||||||||||.||||||||||.||||
 Worm    78 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHE 142

  Fly   134 DPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQ 198
            |||:::||.:|||.:||||||||:||||:|||||.||||||||||||:|||||||||||||||||
 Worm   143 DPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQ 207

  Fly   199 LDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR 263
            ||.||||||||||||||||||||:|||||||||||||||:|||||||||||||||||||||||||
 Worm   208 LDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQR 272

  Fly   264 TLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKI 328
            ||||||||:|||||||:||:||||||||||||||||||||||||||.|||||:||||||||:.||
 Worm   273 TLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKI 337

  Fly   329 AKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESKLD 393
            .||||||:||:|||||.|:.|||||||||||:||||||||:||.||||||||||.|.|:||:|||
 Worm   338 TKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLD 402

  Fly   394 YKPV 397
            ||||
 Worm   403 YKPV 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	314/381 (82%)
		AAA	179..311	CDD:278434	124/131 (95%)
rpt-4	NP_001022113.1	RPT1	21..404	CDD:224143	314/382 (82%)
		AAA	188..320	CDD:278434	124/131 (95%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158472
Domainoid	1	1.000	251	1.000	Domainoid score	I1148
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H100630
Inparanoid	1	1.050	647	1.000	Inparanoid score	I430
Isobase	1	0.950	-	0	Normalized mean entropy	S249
OMA	1	1.010	-	-		QHG53508
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	1	1.000	-	-		FOG0003819
OrthoInspector	1	1.000	-	-		otm14711
orthoMCL	1	0.900	-	-		OOG6_101751
Panther	1	1.100	-	-	LDO	PTHR23073
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R997
SonicParanoid	1	1.000	-	-		X2663
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	15	14.890