Protein Alignment Rpt4 and rpt-5

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_491672.1
• Gene: rpt-5 / 172238
• WormBaseID: WBGene00004505
• Length: 430
• Species: Caenorhabditis elegans
• Alignment Length: 412
• Identity: 166/412 - (40%)
• Similarity: 243/412 - (58%)
• Gaps: 44/412 - (10%)

  Fly     6 TPMPDN-LRVKALSEYRKKLLEHK--EIEGRLKEKREEIK-------------DLTKLYDKSEN- 53
            |.:.|| :|:.. ||.::  :.|.  .::.|:||..|.||             :|..|.|.:|.
 Worm    38 THLLDNEIRIMR-SEVQR--INHSATTLKERIKENTERIKVNKTLPYLVSNVVELLDLEDNTEEE 99

  Fly    54 ----DLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRY--VVGCRRQLDKAKLKSGTRVALDMTT 112
                ||.|             |.|:...|..:|....:  |||.   :|..:||.|..|.::..:
 Worm   100 GANVDLDA-------------QKTKCAVIKTSTRATYFLPVVGL---VDPDELKPGDLVGVNKDS 148

  Fly   113 LTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKG 177
            ..|:..||.|.|..|..|..::.....||.|||...||:||.|.:.||:.:.:.|:.:||.||||
 Worm   149 YLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKG 213

  Fly   178 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDE 242
            .|:|||||||||::|||||:|..:.|||:....:|..:||:.|:|:|:.|..|::..|.|||:||
 Worm   214 VLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDE 278

  Fly   243 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKI 307
            :||||.:||....:.|||:|||::|||||:|||.....:|:|.||||.|.|||||||.|||||||
 Worm   279 LDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKI 343

  Fly   308 EIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQ 372
            |:|.|||.||..|::||:.|:..:.::::|.:.:.:|:||||..:.||.|||:.|:|.:...::.
 Worm   344 ELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILH 408

  Fly   373 EDFMKAVRKVSDNKKLESKLDY 394
            ||||.|:.:|...||  :.|:|
 Worm   409 EDFMDAILEVQAKKK--ASLNY 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	163/404 (40%)
		AAA	179..311	CDD:278434	75/131 (57%)
rpt-5	NP_491672.1	RPT1	17..423	CDD:224143	162/403 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820