DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt4 and Rpt4

DIOPT Version :10

Sequence 1:NP_572308.3 Gene:Rpt4 / 31567 FlyBaseID:FBgn0028685 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_321726.5 Gene:Rpt4 / 1281769 VectorBaseID:AGAMI1_012379 Length:392 Species:Anopheles gambiae


Alignment Length:397 Identity:368/397 - (92%)
Similarity:380/397 - (95%) Gaps:5/397 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTVTATPMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIV 65
            |||.     |..|.|||.:||||||||||:|.||||.||.:|:|||.:|||||||||||||||||
Mosquito     1 MTVA-----DASREKALEDYRKKLLEHKEVESRLKEVRETLKELTKQFDKSENDLKALQSVGQIV 60

  Fly    66 GEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNM 130
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Mosquito    61 GEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKTKLKSGTRVALDMTTLTIMRYLPREVDPLVYNM 125

  Fly   131 SHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAV 195
            ||||||:|||||||||::|||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   126 SHEDPGEVTYSAIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAV 190

  Fly   196 ASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADRE 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   191 ASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADRE 255

  Fly   261 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   256 IQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHA 320

  Fly   326 LKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLES 390
            ..|||||:|||||:|||||||||||||||||||||||||||||||||||||||||||:|||:|||
Mosquito   321 APIAKHGDIDYEAVVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVADNKRLES 385

  Fly   391 KLDYKPV 397
            |||||||
Mosquito   386 KLDYKPV 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt4NP_572308.3 PRK03992 13..387 CDD:179699 353/373 (95%)
Rpt4XP_321726.5 PRK03992 7..381 CDD:179699 349/373 (94%)

Return to query results.
Submit another query.