Protein Alignment Rpt4 and Psmc4

DIOPT Version :9

• Sequence 1: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_476463.1
• Gene: Psmc4 / 117262
• RGDID: 621102
• Length: 418
• Species: Rattus norvegicus
• Alignment Length: 389
• Identity: 166/389 - (42%)
• Similarity: 245/389 - (62%)
• Gaps: 2/389 - (0%)

  Fly     7 PMPDNLRVKALSEYRKKLLEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQ 71
            |.|::|. ...|.|:|...|.:.:|.:.:..::|.|:|.|.:..::.::|.:||:..::|:.|:.
  Rat    32 PEPEDLE-DLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEA 95

  Fly    72 LTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 136
            :.::..||.:|.|..|.|.....:|:..||....|||...:..::..||.|.|..:..::.:...
  Rat    96 VDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKP 160

  Fly   137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 201
            ||.|:.|||:..|.:|:||.:||||.:.||:.::||.||:|.|:|||||.|||:||:|||....|
  Rat   161 DVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 225

  Fly   202 NFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 266
            .|::||.|..|.||:||..|::|::|..|:::.|.|||:||||||..:||...|.||||:||.|:
  Rat   226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290

  Fly   267 ELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
            ||||||||||....||:||||||.||||||||||||||||||.|||:.:.:..|......|:...
  Rat   291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLS 355

  Fly   332 GEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKLESKLDYK 395
            .|:|.|..|...|..:|||:.::|.|:|:.|:|..|..|:.:||.||.:.|....:.|.:. ||
  Rat   356 EEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF-YK 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	161/381 (42%)
		AAA	179..311	CDD:278434	84/131 (64%)
Psmc4	NP_476463.1	PTZ00454	34..418	CDD:240423	163/385 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820