DRSC/TRiP Functional Genomics Resources

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Protein Alignment wuho and Wdr4

DIOPT Version :9

Sequence 1:NP_572307.1 Gene:wuho / 31566 FlyBaseID:FBgn0029857 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_067297.2 Gene:Wdr4 / 57773 MGIID:1889002 Length:456 Species:Mus musculus


Alignment Length:425 Identity:117/425 - (27%)
Similarity:183/425 - (43%) Gaps:111/425 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TSQSQESCTAAAAASTATAASGQAPGGKEQQLANQPEEGGTSASASGLGCATSTSVQNVAYSPDG 110
            |:.|.:.|......|||...:             .||:.|.....:..|   |.|:....:|..|
Mouse    70 TTGSDDDCVFTYDCSTAEKKA-------------TPEDKGEDGQPADTG---SDSILASTFSKSG 118

  Fly   111 QLLAVTTSGKQKALLLYRSRPENARLLSARPLARASSALRFCSDSSSILVTDKTGDCYQYDCVEV 175
            :..|:|...|:  |:|:|::|  .:.||.|.:.|..:||.|.:....:||.||:||.|.:..:|.
Mouse   119 RYFALTDDSKR--LILFRTKP--WQCLSVRMVVRRCTALTFTASEDRVLVADKSGDVYSFSVLEP 179

  Fly   176 EAPPRLLLGHLSVVYDILWSEDQQHIITCDRDDKIRVTNYPATFDIHSYCLGHREFVSGLALLTE 240
            :...||.|||||::.|:..|.|.|.::|.|||:||||:...|...|.|:||||.||||.: |:..
Mouse   180 DGCGRLELGHLSMLLDVAVSPDDQFVLTADRDEKIRVSWAAAPHSIESFCLGHTEFVSRI-LVVP 243

  Fly   241 QH---IASASGDKTLRVWNYIQGKEL-------LQHELPAPAVR--------------------- 274
            .|   :.|:|||.|||:|.|..|::|       ||.....|..:                     
Mouse   244 SHPELLLSSSGDGTLRLWEYRSGRQLQCCDLAGLQEPGEQPGHKGLAASRIAFWGQESYVVLLCE 308

  Fly   275 ----LLVRQLEPEK---VFQAAVLFYEHV------DALGLYRLERSSDD---TWSVTATQLVCAE 323
                :.|.||:..:   ||:..:.|...|      :|.||:.|:...|.   .|...        
Mouse   309 CVPVVFVFQLDASRQQLVFRQRLTFPHRVWDVVFEEARGLWVLQDCRDAPLVLWRPV-------- 365

  Fly   324 AGSWSISNFTLTSDRIYITGAENERLSLRVYDIATGQPASSGVPEGWLKMVLDG-LGANEEGAPP 387
            .|.|..:.          .||.:.||             .|.:.|.|  .:|:| :|.:      
Mouse   366 GGEWQAAP----------DGAVSPRL-------------CSHLRESW--AMLEGSVGTD------ 399

  Fly   388 FIPEDLSVWFKKRFDNVSDYLERKKRRIEEQQQQK 422
               :.....:|..|||::.||::|:.|:::|.::|
Mouse   400 ---DSFRSLYKATFDNMTSYLKKKEERLQQQLKKK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wuhoNP_572307.1 WD40 repeat 101..142 CDD:293791 12/40 (30%)
WD40 104..361 CDD:295369 89/303 (29%)
WD40 <107..>266 CDD:225201 68/168 (40%)
WD40 repeat 147..184 CDD:293791 13/36 (36%)
WD40 repeat 189..220 CDD:293791 13/30 (43%)
WD40 repeat 233..267 CDD:293791 16/43 (37%)
Wdr4NP_067297.2 WD40 60..>272 CDD:392136 79/222 (36%)
WD40 repeat 110..147 CDD:293791 12/40 (30%)
WD40 repeat 150..186 CDD:293791 12/35 (34%)
WD40 187..>362 CDD:225201 56/175 (32%)
WD40 repeat 194..229 CDD:293791 15/34 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848251
Domainoid 1 1.000 50 1.000 Domainoid score I11637
eggNOG 1 0.900 - - E1_KOG3914
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 127 1.000 Inparanoid score I4662
Isobase 1 0.950 - 0 Normalized mean entropy S4328
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004300
OrthoInspector 1 1.000 - - oto94785
orthoMCL 1 0.900 - - OOG6_103715
Panther 1 1.100 - - LDO PTHR16288
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1552
SonicParanoid 1 1.000 - - X3033
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.730

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