DRSC/TRiP Functional Genomics Resources

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Protein Alignment wuho and wdr4

DIOPT Version :9

Sequence 1:NP_572307.1 Gene:wuho / 31566 FlyBaseID:FBgn0029857 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001119907.2 Gene:wdr4 / 570351 ZFINID:ZDB-GENE-060810-10 Length:413 Species:Danio rerio


Alignment Length:389 Identity:105/389 - (26%)
Similarity:171/389 - (43%) Gaps:87/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 QPEEGGTSASASGLGC--ATSTSVQNVAYSPDGQLLAVTTSGKQKALLLYRSRPENARLLSARPL 142
            :|:|......::|.|.  ..|.|:...|.|..|:.:|:|..  .|.|:|:.:.| :.:.:|.|.:
Zfish    41 KPKEADVDNKSAGEGSEEKDSDSILAFAISASGKHVALTDD--HKRLVLFCTEP-SWKCISTRWV 102

  Fly   143 ARASSALRFCSDSSSILVTDKTGDCYQYDCVEVEAPPRLLLGHLSVVYDILWSEDQQHIITCDRD 207
            .|..::|.|......:.|.||:||.|.:..:|......|.|||||::.|:..|.|.::|||.|||
Zfish   103 VRRCTSLAFTQAEDELYVADKSGDVYSFSILEPHKAGELKLGHLSMLLDVALSPDDKYIITADRD 167

  Fly   208 DKIRVTNYPATFDIHSYCLGHREFVSGLALLTEQH---IASASGDKTLRVWNYIQGKELLQHELP 269
            :||||:...:.::|.::||||.||||.| |:...|   :.|.|||.|:.||:|..|:.|  |.:.
Zfish   168 EKIRVSFRRSPYNIQAFCLGHTEFVSSL-LVPAGHPDWLLSGSGDGTVNVWHYETGRRL--HSVD 229

  Fly   270 AP-------------AVRLLVRQLEPEKV------FQAAVLFYEHVDALGLYRLERSSD------ 309
            ..             ||..::...:.:.|      |.:..||  .||. |...|.:.:|      
Zfish   230 MRKFGLDSENTEKRFAVSRIISSPDGQHVAVQCEGFPSVQLF--TVDC-GTESLLKPADTLTLPL 291

  Fly   310 DTWSVTATQLVCAEAGSWSISNFTLTSDRIYITGAENERLSLRVYDIATGQPASSGVPEGWLKMV 374
            ..|.||..    :|...|.:    |.|:.:.:....:.....|:.|        |..||  ||.|
Zfish   292 SPWDVTFD----SENQLWVL----LESEDMKVLLYRHSEQHWRLCD--------SESPE--LKKV 338

  Fly   375 LDGLGANEEGAPPFIPEDLSVW----------------FKKRFDNVSDYLERKKRRIEEQQQQK 422
            .:.|...              |                :|..|||::.||::|:.|::.:.:::
Zfish   339 TNALQTQ--------------WHLFKGSVGLESQFKHLYKVNFDNMASYLQKKQERLDLENKKR 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wuhoNP_572307.1 WD40 repeat 101..142 CDD:293791 11/40 (28%)
WD40 104..361 CDD:295369 83/284 (29%)
WD40 <107..>266 CDD:225201 61/161 (38%)
WD40 repeat 147..184 CDD:293791 10/36 (28%)
WD40 repeat 189..220 CDD:293791 13/30 (43%)
WD40 repeat 233..267 CDD:293791 14/36 (39%)
wdr4NP_001119907.2 WD40 <46..292 CDD:225201 78/254 (31%)
WD40 61..>260 CDD:295369 68/204 (33%)
WD40 repeat 64..100 CDD:293791 10/38 (26%)
WD 1 101..140 10/38 (26%)
WD40 repeat 106..144 CDD:293791 10/37 (27%)
WD 2 144..183 18/38 (47%)
WD40 repeat 150..187 CDD:293791 15/36 (42%)
WD 3 187..227 19/42 (45%)
WD40 repeat 192..238 CDD:293791 16/48 (33%)
WD40 repeat 246..274 CDD:293791 5/29 (17%)
WD 4 286..328 8/49 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..413 0/3 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593666
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3914
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4860
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D399439at33208
OrthoFinder 1 1.000 - - FOG0004300
OrthoInspector 1 1.000 - - oto41275
orthoMCL 1 0.900 - - OOG6_103715
Panther 1 1.100 - - LDO PTHR16288
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1552
SonicParanoid 1 1.000 - - X3033
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.790

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