DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Top3beta and TOP3B

DIOPT Version :10

Sequence 1:NP_511059.2 Gene:Top3beta / 31565 FlyBaseID:FBgn0026015 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_003926.1 Gene:TOP3B / 8940 HGNCID:11993 Length:862 Species:Homo sapiens


Alignment Length:882 Identity:501/882 - (56%)
Similarity:613/882 - (69%) Gaps:27/882 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSVLMVAEKPSLAASLAGILSNGRCTAKRGTGNGCSTHEWTGNFRNEGSVHFRMTSVCGHVMSL 65
            ||:|||||||||||.|:|.|||.|..::.:|....||.||:||.|..: .|.|:|||||||||:|
Human     1 MKTVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQ-PVRFKMTSVCGHVMTL 64

  Fly    66 DFNKKYNCWDKVDPIQLFGCA-TEKKETNPKQNMRKFLAHEARGCDYLVLWLDCDKEGENICFEV 129
            ||..|||.||||||.:||..| |||||.|||.||.|||..|.|||||:|||||||||||||||||
Human    65 DFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDKEGENICFEV 129

  Fly   130 MDAVKHVINNVYSDQVT-YRAHFSAITEKDIKKAMETLGHPNENEAKSVDARQELDLRIGCAFTR 193
            :|||..|:|..:..:.| :||.||:||:.||..||..||.|:.|||.||||||||||||||||||
Human   130 LDAVLPVMNKAHGGEKTVFRARFSSITDTDICNAMACLGEPDHNEALSVDARQELDLRIGCAFTR 194

  Fly   194 FQTKFFQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQLLAGQPE---VTLEW 255
            ||||:||.:||||||||||:||||||||||||:|||.||:||||::|.||......:   :.|:|
Human   195 FQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNTDKDRSLLLDW 259

  Fly   256 ARGRVFKKDIAIMLLNRVKEHKKATVESVASKEAYKSKPQALNTVELMRICSSGLGIGPFQAMQI 320
            .|.|||.::||.|.||..|..|:|.||:.:.||..|.:|.||||||::|:.||.||:||..|||.
Human   260 DRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLALNTVEMLRVASSSLGMGPQHAMQT 324

  Fly   321 AERLYTQGYISYPRTETNQYPTNFDLPAVLHVLKPSADFGEEARSILGD-IQTPRKGKDAGDHPP 384
            |||||||||||||||||..||.||||...|........:.:..:.:|.: |..||||.|||||||
Human   325 AERLYTQGYISYPRTETTHYPENFDLKGSLRQQANHPYWADTVKRLLAEGINRPRKGHDAGDHPP 389

  Fly   385 ITPMKLGNRSDFDRDTWRVYEFICRHFMGTVSRDLKYRVTTAKLSVGMETFSCTASVLIDAGFTK 449
            |||||....::...|.||:||:|.|||:.|||.|.||..:|....:|.|.|:|:...::..|||:
Human   390 ITPMKSATEAELGGDAWRLYEYITRHFIATVSHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTE 454

  Fly   450 VMTWSAFGKDEPQPPFVQGTQVAINDVRLIESQTGPPDYLTESELITLMEEHGIGTDASIPVHIN 514
            ||.|.:...:|..|...:|....:.:|:::|.||.|||||||:|||||||:||||||||||||||
Human   455 VMPWQSVPLEESLPTCQRGDAFPVGEVKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHIN 519

  Fly   515 NICQRNYVHIENGRKLMPTTLGIVLVHGYQKIDPELVLPTMRTEVERMLTLIAQGSANFQDVLRH 579
            ||||||||.:|:||:|.||.|||||||||.|||.||||||:|:.||:.|.|||||.|:::.||.|
Human   520 NICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGH 584

  Fly   580 AIKIFKLKFMYFVKNIDSMDALFEVSFSPLAESGKAHSRCGKCRRYMKYIQTKPARLHCSHCDET 644
            .:.:||.||.|||.:|..||.|.||||||||.:||..||||||.|:|||||.||:||||||||||
Human   585 TLDVFKRKFHYFVDSIAGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDET 649

  Fly   645 YALP-IGNVKVYREFKCPLDDFDLLAFSTGVKGRSYPFCPYCYNHPPFSDMPHLGGCNTCTNANC 708
            |.|| .|.:|:|:|.:||||||:|:.:|:|.:|:|||.||||||||||.||....|||.||:.:|
Human   650 YTLPQNGTIKLYKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPSC 714

  Fly   709 PHSLNTLGISSCVECPTGVLVLDCTLAPTWKLGCNRCDVIINCFKGATKITVEEAKCQECGAQQV 773
            .|||:.|||..||||.:||||||.|..|.||:.||:|:|:.:||:.|.::.|....|..|.|..:
Human   715 QHSLSMLGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFENAHRVRVSADTCSVCEAALL 779

  Fly   774 NVVYKSDKSKFKDGSEEKSGCIFCSADFSHLVEKHRAVASRPVRSGGGFRGGKAGRGGGGMGGAA 838
            :|.:...||.......:..||:||...|..|||...|.:..|:..||  .|.:.||         
Human   780 DVDFNKAKSPLPGDETQHMGCVFCDPVFQELVELKHAASCHPMHRGG--PGRRQGR--------- 833

  Fly   839 FGSGGAVTAGGGPNAGGGVRGSRVAKDKMGQLASYFV 875
             |.|.|....|.||       .|..||||..||:|||
Human   834 -GRGRARRPPGKPN-------PRRPKDKMSALAAYFV 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Top3betaNP_511059.2 TOPRIM_TopoIA_TopoIII 4..166 CDD:173782 103/163 (63%)
TOP1Ac 171..588 CDD:238110 247/420 (59%)
TOP3BNP_003926.1 TOPRIM_TopoIA_TopoIII 3..167 CDD:173782 103/164 (63%)
TOP1Ac 172..593 CDD:238110 247/420 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 821..854 15/51 (29%)

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