Sequence 1: | NP_001284938.1 | Gene: | Top3beta / 31565 | FlyBaseID: | FBgn0026015 | Length: | 875 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033436.1 | Gene: | Top3a / 21975 | MGIID: | 1197527 | Length: | 1003 | Species: | Mus musculus |
Alignment Length: | 950 | Identity: | 302/950 - (31%) |
---|---|---|---|
Similarity: | 421/950 - (44%) | Gaps: | 160/950 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MKSVLMVAEKPSLAASLAGILSNGRCTAKRGTGNGCSTHEWTGNFRNEGSVHFRMTSVCGHVMSL 65
Fly 66 DFNKKYNCWDKVDPIQLFGCATEKKETNPKQNMRKFLAHEARGCDYLVLWLDCDKEGENICFEVM 130
Fly 131 DAVKHVINNVYSDQVTYRAHFSAITEKDIKKAMETLGHPNENEAKSVDARQELDLRIGCAFTRFQ 195
Fly 196 TKFFQDRYGD-LDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHLQLLAGQPEVTLE--WAR 257
Fly 258 GRVFKKDIAIMLLNRVKEHKKATVESVASKEAYKSKPQALNTVELMRICSSGLGIGPFQAMQIAE 322
Fly 323 RLYTQGYISYPRTETNQYPTNFDLPAVLHVLKPSADFGEEARSIL--GDIQTPRKG-KDAGDHPP 384
Fly 385 ITPMKLGNRSDFDRDTWRVYEFICRHFMGTVSRDLKYRVTTAKLSVGMETFSCTASVLIDAGFTK 449
Fly 450 VMT---WSAFGKDEPQPPFVQGTQVAINDVRLIESQTGPPDYLTESELITLMEEHGIGTDASIPV 511
Fly 512 HINNICQRNYVHIENGRKLMPTTLGIVLVHGYQKIDPELVLPTMRTEVERMLTLIAQGSANFQDV 576
Fly 577 LRHAIKIFKLKFMYFVKNIDSMDALFEVSFSPLAESGKAHS----------RCGKCRRYMKYIQT 631
Fly 632 KPA---RLHC---SHCDETYALPIGNVKVYREFKCPLDDFDLLAFSTGVKGRSYPFCPYCYNHP- 689
Fly 690 ----------------PFSDMPHLGGCN-------------TCTNANCP-------HSLNTLGIS 718
Fly 719 S------CVECPT--GVLVLDCTLAPTWKLGCNRCDVIINCFKGATKITVEEAKCQECGAQQVNV 775
Fly 776 VYKSDKSKFKDGSEEKSGC-IFCSADFSHLVEKHRAVASRPVRSGGGFRGGKAGRGGGGMG---- 835
Fly 836 -GA---AFGSGGAVTAGG-----------------GPNAG 854 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Top3beta | NP_001284938.1 | PRK07219 | 4..781 | CDD:235971 | 279/846 (33%) |
TOPRIM_TopoIA_TopoIII | 4..166 | CDD:173782 | 59/161 (37%) | ||
TOP1Ac | 171..588 | CDD:238110 | 172/425 (40%) | ||
Top3a | NP_033436.1 | TopA | 35..635 | CDD:223624 | 236/611 (39%) |
TOPRIM_TopoIA_TopoIII | 35..193 | CDD:173782 | 59/162 (36%) | ||
TOP1Ac | 202..617 | CDD:238110 | 172/421 (41%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 400..426 | 13/28 (46%) | |||
YrdD | <652..722 | CDD:223625 | 16/91 (18%) | ||
zf-C4_Topoisom | 655..694 | CDD:279704 | 9/54 (17%) | ||
zf-GRF | 813..854 | CDD:284302 | 14/55 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 856..888 | 8/31 (26%) | |||
zf-GRF | 897..941 | CDD:284302 | 3/21 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 946..991 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0550 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG62408 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000966 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |