DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11700 and RAD23

DIOPT Version :9

Sequence 1:	NP_572306.1	Gene:	CG11700 / 31564	FlyBaseID:	FBgn0029856	Length:	301	Species:	Drosophila melanogaster
Sequence 2:	NP_010877.3	Gene:	RAD23 / 856674	SGDID:	S000000763	Length:	398	Species:	Saccharomyces cerevisiae

Alignment Length:	227	Identity:	41/227 - (18%)
Similarity:	78/227 - (34%)	Gaps:	40/227 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 KTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLV 70
            |....:.:.|::|||:||...|.|:...........:||:.||.|::.:|:|:..::....:..:
Yeast     7 KNFKKEKVPLDLEPSNTILETKTKLAQSISCEESQIKLIYSGKVLQDSKTVSECGLKDGDQVVFM 71

  Fly    71 LRLRGGMQIFV---------KTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQR-------- 118
            :..:...:..|         .|..|:..:.|..||.......|....:...|.|.|.
Yeast    72 VSQKKSTKTKVTEPPIAPESATTPGRENSTEASPSTDASAAPAATAPEGSQPQEEQTATTERTES 136

  Fly   119 -----LIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178
                 .:.|.:..|....:.:...|:|.   :...||....               .|..::|.:
Yeast   137 ASTPGFVVGTERNETIERIMEMGYQREE---VERALRAAFN---------------NPDRAVEYL 183

  Fly   179 KARIHDKEGIPPDQQRLIFAGKQLEDGRTLSD 210
            ...|.:....|..||:...|.:|.....|.::
Yeast   184 LMGIPENLRQPEPQQQTAAAAEQPSTAATTAE 215

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11700	NP_572306.1	Ubiquitin	1..76	CDD:176398	16/69 (23%)
		UBQ	1..72	CDD:214563	16/65 (25%)
		Ubiquitin	77..152	CDD:176398	16/96 (17%)
		UBQ	77..148	CDD:214563	14/92 (15%)
		Ubiquitin	153..228	CDD:176398	9/58 (16%)
		UBQ	153..224	CDD:214563	9/58 (16%)
		UBQ	229..296	CDD:214563
		UBQ	229..296	CDD:294102
RAD23	NP_010877.3	rad23	2..398	CDD:273167	41/227 (18%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900