DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11700 and UBQ13

DIOPT Version :10

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_176714.4 Gene:UBQ13 / 842845 AraportID:AT1G65350 Length:319 Species:Arabidopsis thaliana


Alignment Length:310 Identity:252/310 - (81%)
Similarity:272/310 - (87%) Gaps:15/310 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:||||||||||..||:.|||||.||.||:||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly    66 TIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGR 130
            |::||||||||||||||||||||||||||.||||:||||||||||..||:.|||||.||.||:||
plant    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRL 195
            ||:| |||||||::||||||||||||||||||||||||||.||:|:||||:|.|||.||||||||
plant   131 TLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 194

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARIHD 260
            |||||||||||||:|||||||||||||||||||||||||||||||||||||.|.||.:|||:|.|
plant   195 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQD 259

  Fly   261 KDGIPPDHQRLIFAGKQLEDG--------------RTLSDYNIQKESTLH 296
            |:|||||.|||||||||||.|              ..|:|||||||||||
plant   260 KEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYNIQKESTLH 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130 62/74 (84%)
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 61/74 (82%)
Ubl_ubiquitin 153..228 CDD:340501 67/74 (91%)
Ubl1_cv_Nsp3_N-like 229..296 CDD:475130 54/80 (68%)
UBQ13NP_176714.4 Ubl_ubiquitin 1..76 CDD:340501 62/74 (84%)
Ubl_ubiquitin 77..151 CDD:340501 61/74 (82%)
Ubl_ubiquitin 152..227 CDD:340501 67/74 (91%)
Ubl1_cv_Nsp3_N-like 228..317 CDD:475130 56/82 (68%)

Return to query results.
Submit another query.