DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and AT1G53945

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_175798.2 Gene:AT1G53945 / 841834 AraportID:AT1G53945 Length:121 Species:Arabidopsis thaliana


Alignment Length:146 Identity:56/146 - (38%)
Similarity:74/146 - (50%) Gaps:37/146 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 MQIFVKTLTGKTITLEV-EPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
            |||.:||:.||:|.||| :.||:|                                  |..|..|
plant     1 MQISIKTVKGKSINLEVADSSDTI----------------------------------DLKINGE 31

  Fly   217 STLHLVLRLRGG--MQIFVKTLTGKTITLEVEPSDTIKHVKARIHDKDGIPPDHQRLIFAGKQLE 279
            .|..|||||...  |:|||.|:..||..|||:.|||||.:|:.|||:.|.|.|.|.|...|.:|:
plant    32 PTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLK 96

  Fly   280 DGRTLSDYNIQKESTL 295
            :..|:|||||:.::.|
plant    97 NNATISDYNIKPDANL 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398 23/75 (31%)
UBQ 153..224 CDD:214563 20/71 (28%)
UBQ 229..296 CDD:214563 33/67 (49%)
UBQ 229..296 CDD:294102 33/67 (49%)
AT1G53945NP_175798.2 Ubiquitin_like_fold 46..112 CDD:391949 32/65 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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