DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and AT4G01000

DIOPT Version :10

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_192009.1 Gene:AT4G01000 / 826414 AraportID:AT4G01000 Length:415 Species:Arabidopsis thaliana


Alignment Length:328 Identity:80/328 - (24%)
Similarity:141/328 - (42%) Gaps:67/328 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 64
            :|.||:.|.||::||.. .|....|.:|.:|.::.:.|...||||.||..:.:|..:|    |.:
plant     9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPD 69

  Fly    65 STIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE-------------NVKAKIQDKEENPPEH 116
            :|:.|||.||||...|...|.|..:....:.::..:             |.:.::|:.::.    
plant    70 ATVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHVNAENRLQEWKDG---- 130

  Fly   117 QRLIFGGKHLENGRTLSDYNIQKESTIYLVLRL--------RGGMQIFV---KTLTGKTI-TLEV 169
                      |.||     |::|::..||..:.        .|..|.:|   |..:.|.| .:::
plant   131 ----------EEGR-----NLEKKALEYLKKQSNKVKQGVGNGATQKYVNKYKEESDKCILAVDL 180

  Fly   170 EPSDSIENVKARIHDKEGIPPDQQR--LIFAGKQ-LEDGRTLSDYNIQKESTLHLVLRLRGGMQI 231
            ..::|.:|.|.:.  |.|...::::  .|:.||: :||..  ||.:..:|....:||. .||.. 
plant   181 ALNESFKNGKRKA--KIGAESEKKKRLKIWKGKRAVEDSD--SDDSDDEEDEKSVVLN-NGGHD- 239

  Fly   232 FVKTLTGKTI--TLEVEPSDTIKH-----VKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNI 289
              ...:||:.  :...|.:|.:.|     ||..|....||..:....:.....::|..|::|...
plant   240 --GDSSGKSSCNSGSEEENDAVMHRSFDVVKEEITGVQGIIEEEMNDLPVSVAVDDANTVADEMD 302

  Fly   290 QKE 292
            |.|
plant   303 QLE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130 28/75 (37%)
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 12/95 (13%)
Ubl_ubiquitin 153..228 CDD:340501 20/81 (25%)
Ubl1_cv_Nsp3_N-like 229..296 CDD:475130 15/71 (21%)
AT4G01000NP_192009.1 Ubl1_cv_Nsp3_N-like 10..156 CDD:475130 42/168 (25%)
SDE2_2C 351..402 CDD:463835
Blue background indicates that the domain is not in the aligned region.

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