DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and AT4G01000

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_001319838.1 Gene:AT4G01000 / 826414 AraportID:AT4G01000 Length:415 Species:Arabidopsis thaliana


Alignment Length:328 Identity:80/328 - (24%)
Similarity:141/328 - (42%) Gaps:67/328 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKE 64
            :|.||:.|.||::||.. .|....|.:|.:|.::.:.|...||||.||..:.:|..:|    |.:
plant     9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPD 69

  Fly    65 STIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE-------------NVKAKIQDKEENPPEH 116
            :|:.|||.||||...|...|.|..:....:.::..:             |.:.::|:.::.    
plant    70 ATVNLVLSLRGGKGGFGSLLRGGGMKAGQKKTNNFDACRDMSGRRLRHVNAENRLQEWKDG---- 130

  Fly   117 QRLIFGGKHLENGRTLSDYNIQKESTIYLVLRL--------RGGMQIFV---KTLTGKTI-TLEV 169
                      |.||     |::|::..||..:.        .|..|.:|   |..:.|.| .:::
plant   131 ----------EEGR-----NLEKKALEYLKKQSNKVKQGVGNGATQKYVNKYKEESDKCILAVDL 180

  Fly   170 EPSDSIENVKARIHDKEGIPPDQQR--LIFAGKQ-LEDGRTLSDYNIQKESTLHLVLRLRGGMQI 231
            ..::|.:|.|.:.  |.|...::::  .|:.||: :||..  ||.:..:|....:||. .||.. 
plant   181 ALNESFKNGKRKA--KIGAESEKKKRLKIWKGKRAVEDSD--SDDSDDEEDEKSVVLN-NGGHD- 239

  Fly   232 FVKTLTGKTI--TLEVEPSDTIKH-----VKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNI 289
              ...:||:.  :...|.:|.:.|     ||..|....||..:....:.....::|..|::|...
plant   240 --GDSSGKSSCNSGSEEENDAVMHRSFDVVKEEITGVQGIIEEEMNDLPVSVAVDDANTVADEMD 302

  Fly   290 QKE 292
            |.|
plant   303 QLE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398 28/75 (37%)
UBQ 1..72 CDD:214563 25/71 (35%)
Ubiquitin 77..152 CDD:176398 12/95 (13%)
UBQ 77..148 CDD:214563 12/83 (14%)
Ubiquitin 153..228 CDD:176398 20/81 (25%)
UBQ 153..224 CDD:214563 19/77 (25%)
UBQ 229..296 CDD:214563 15/71 (21%)
UBQ 229..296 CDD:294102 15/71 (21%)
AT4G01000NP_001319838.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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