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Protein Alignment CG11700 and DSK2
DIOPT Version :9
Sequence 1: | NP_572306.1 |
Gene: | CG11700 / 31564 |
FlyBaseID: | FBgn0029856 |
Length: | 301 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_179311.1 |
Gene: | DSK2 / 816225 |
AraportID: | AT2G17200 |
Length: | 551 |
Species: | Arabidopsis thaliana |
Alignment Length: | 76 |
Identity: | 24/76 - (31%) |
Similarity: | 39/76 - (51%) |
Gaps: | 10/76 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 147 LRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
:|...|.:..|||....| :|:.|..:.....:|.:|||||:.|:.|:|.:||..|
plant 22 IRCSNGTKFSVKTSLDST----------VESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSY 76
Fly 212 NIQKESTLHLV 222
.:|.:.|:|:|
plant 77 GLQADHTIHMV 87
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG11700 | NP_572306.1 |
Ubiquitin |
1..76 |
CDD:176398 |
|
UBQ |
1..72 |
CDD:214563 |
|
Ubiquitin |
77..152 |
CDD:176398 |
1/4 (25%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.