DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and ubtd1a

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:XP_005156917.1 Gene:ubtd1a / 563264 ZFINID:ZDB-GENE-070424-93 Length:230 Species:Danio rerio


Alignment Length:70 Identity:25/70 - (35%)
Similarity:40/70 - (57%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKEST 66
            |:.|:..|||.:.|.|..:|:|..:|.::|.:|:....|||..|.||.|.:...|.|..|||:..
Zfish   154 QLKVRLSTGKDLRLSVTMADSIRQLKKQLQIQEDIDTAHQRWFFSGKLLTDKTRLQDTKIQKDFV 218

  Fly    67 IYLVL 71
            |.:::
Zfish   219 IQVIV 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398 25/70 (36%)
UBQ 1..72 CDD:214563 25/70 (36%)
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398
UBQ 153..224 CDD:214563
UBQ 229..296 CDD:214563
UBQ 229..296 CDD:294102
ubtd1aXP_005156917.1 UBD 29..133 CDD:293064
UBQ 153..224 CDD:214563 25/70 (36%)
UBQ 155..224 CDD:294102 24/69 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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