DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and ubtd2

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_001002718.2 Gene:ubtd2 / 436991 ZFINID:ZDB-GENE-040718-473 Length:244 Species:Danio rerio


Alignment Length:201 Identity:42/201 - (20%)
Similarity:74/201 - (36%) Gaps:55/201 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VKAKIQDKEENPPEHQRLIFGGKH--LENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKT 88
            :||..|..|.|..|..:.|..|..  |.:|.....|:           .|....|:.|..|:...
Zfish    78 LKAAAQAFESNDHELAQAIIDGASITLPHGALTECYD-----------ELGNRYQLPVYCLSPPV 131

  Fly    89 ITLEVE-PSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGG 152
            ..:|.: .|:|||..:|...:.:|                                         
Zfish   132 NMIEEKSESETIEVPEAPASEGQE----------------------------------------- 155

  Fly   153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
            .|:.::..||:.:.|.|..|||::.:|.|:..:||:....||..|:|:.|.|...|.:..|.::.
Zfish   156 CQLRLRLSTGRDLRLAVRTSDSVQQMKRRLQTQEGVAATSQRWFFSGRPLTDKMKLEELKISRDY 220

  Fly   218 TLHLVL 223
            .:.:::
Zfish   221 VVQVIV 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398 12/51 (24%)
UBQ 1..72 CDD:214563 11/47 (23%)
Ubiquitin 77..152 CDD:176398 10/75 (13%)
UBQ 77..148 CDD:214563 10/71 (14%)
Ubiquitin 153..228 CDD:176398 20/71 (28%)
UBQ 153..224 CDD:214563 20/71 (28%)
UBQ 229..296 CDD:214563
UBQ 229..296 CDD:294102
ubtd2NP_001002718.2 UBD 32..136 CDD:293064 15/68 (22%)
UBQ 157..227 CDD:214563 20/70 (29%)
UBQ 158..227 CDD:294102 19/69 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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