DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and CG3223

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster


Alignment Length:71 Identity:13/71 - (18%)
Similarity:29/71 - (40%) Gaps:20/71 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 FVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 220
            ::|.:..|.:.|:.:.|                   :..:|..|:.|||..|| :..:|..:.:|
  Fly    29 YLKAVVTKEMHLQFDAS-------------------ELEIIHHGRVLEDADTL-NRTLQPNAVIH 73

  Fly   221 LVLRLR 226
            ...:::
  Fly    74 CFQKIK 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398 13/71 (18%)
UBQ 153..224 CDD:214563 13/67 (19%)
UBQ 229..296 CDD:214563
UBQ 229..296 CDD:294102
CG3223NP_649758.1 UBA_like_SF 373..410 CDD:304366
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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