DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and ubqln4

DIOPT Version :10

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_998521.2 Gene:ubqln4 / 334337 ZFINID:ZDB-GENE-030131-6269 Length:599 Species:Danio rerio


Alignment Length:94 Identity:29/94 - (30%)
Similarity:45/94 - (47%) Gaps:10/94 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 TLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRL 195
            |.::.|....:||         :::.|||...|. .:.:....|:...|..|..:.....||..|
Zfish    13 TNTEENAAASATI---------IKVTVKTPKDKE-EIAIAEDASVAQFKEEISKRFKAKQDQLVL 67

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
            |||||.|:||.||..:.|:...|:|||::
Zfish    68 IFAGKILKDGDTLGQHGIKDGLTVHLVIK 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 4/20 (20%)
Ubl_ubiquitin 153..228 CDD:340501 25/72 (35%)
Ubl1_cv_Nsp3_N-like 229..296 CDD:475130
ubqln4NP_998521.2 Ubl_PLICs 25..96 CDD:340506 26/80 (33%)
rad23 26..311 CDD:273167 25/72 (35%)
UBA_PLICs 556..595 CDD:270582
Blue background indicates that the domain is not in the aligned region.

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