DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and Ubqln4

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_001101158.1 Gene:Ubqln4 / 310633 RGDID:1308273 Length:595 Species:Rattus norvegicus


Alignment Length:75 Identity:27/75 - (36%)
Similarity:42/75 - (56%) Gaps:1/75 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 RGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
            |..:::.|||...|...|..:.: |::..|..|..:.....||..||||||.|:||.||:.:.|:
  Rat    10 RPQIRVTVKTPKDKEEILICDQA-SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIK 73

  Fly   215 KESTLHLVLR 224
            ...|:|||::
  Rat    74 DGLTVHLVIK 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398 1/1 (100%)
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398 26/72 (36%)
UBQ 153..224 CDD:214563 26/70 (37%)
UBQ 229..296 CDD:214563
UBQ 229..296 CDD:294102
Ubqln4NP_001101158.1 UBQ 13..83 CDD:214563 26/70 (37%)
hPLIC_N 13..83 CDD:176403 26/70 (37%)
STI1 186..223 CDD:128966
UBA_PLICs 552..591 CDD:270582
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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