DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and Ubb

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_001300913.1 Gene:Ubb / 22187 MGIID:98888 Length:305 Species:Mus musculus


Alignment Length:296 Identity:269/296 - (90%)
Similarity:283/296 - (95%) Gaps:0/296 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 65
            ||||||||||||||||||||||||||||||||||..||:.|||||.||.||:|||||||||||||
Mouse     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly    66 TIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGR 130
            |::||||||||||||||||||||||||||||||||||||||||||..||:.|||||.||.||:||
Mouse    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRL 195
            ||||||||||||::|||||||||||||||||||||||||||||:||||||:|.||||||||||||
Mouse   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARIHD 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||::|||:|.|
Mouse   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260

  Fly   261 KDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
            |:|||||.||||||||||||||||||||||||||||
Mouse   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398 65/74 (88%)
UBQ 1..72 CDD:214563 61/70 (87%)
Ubiquitin 77..152 CDD:176398 65/74 (88%)
UBQ 77..148 CDD:214563 61/70 (87%)
Ubiquitin 153..228 CDD:176398 71/74 (96%)
UBQ 153..224 CDD:214563 67/70 (96%)
UBQ 229..296 CDD:214563 60/66 (91%)
UBQ 229..296 CDD:294102 60/66 (91%)
UbbNP_001300913.1 Ubl_ubiquitin 1..76 CDD:340501 65/74 (88%)
Ubl_ubiquitin 77..152 CDD:340501 65/74 (88%)
Ubl_ubiquitin 153..228 CDD:340501 71/74 (96%)
Ubl_ubiquitin 229..304 CDD:340501 62/68 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841617
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74981
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D642374at33208
OrthoFinder 1 1.000 - - FOG0000540
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10666
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.810

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