DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and Gm4802

DIOPT Version :9

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:XP_011244373.1 Gene:Gm4802 / 216818 MGIID:3647922 Length:145 Species:Mus musculus


Alignment Length:96 Identity:56/96 - (58%)
Similarity:67/96 - (69%) Gaps:15/96 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
            :|||:||||..||||||:|||:|||||.:|.|.||||||||||:|.|||||||.|||:..||.:|
Mouse    20 VQIFLKTLTDNTITLEVKPSDTIENVKDKIQDSEGIPPDQQRLVFNGKQLEDGCTLSNCYIQNQS 84

  Fly   218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 248
            ||:|.|.|..|:               :|||
Mouse    85 TLYLELPLCDGI---------------IEPS 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398
UBQ 1..72 CDD:214563
Ubiquitin 77..152 CDD:176398
UBQ 77..148 CDD:214563
Ubiquitin 153..228 CDD:176398 52/74 (70%)
UBQ 153..224 CDD:214563 50/70 (71%)
UBQ 229..296 CDD:214563 3/20 (15%)
UBQ 229..296 CDD:294102 3/20 (15%)
Gm4802XP_011244373.1 Ubiquitin_like_fold 20..92 CDD:391949 51/71 (72%)
Ribosomal_L40e 98..143 CDD:366420 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D642374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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