DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and F52C6.3

DIOPT Version :10

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_494127.2 Gene:F52C6.3 / 186085 WormBaseID:WBGene00018660 Length:197 Species:Caenorhabditis elegans


Alignment Length:252 Identity:68/252 - (26%)
Similarity:118/252 - (46%) Gaps:62/252 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 65
            |.:.:||.|||.||:|...|     ||.:::|                              |:.
 Worm     1 MLLSIKTSTGKNITVEAPKS-----VKTEVRD------------------------------KQG 30

  Fly    66 TIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENP-PEHQRLIFGGKHLENG 129
            .::.|...:|         ||..|   :|..||:::|  |||:.::.| .|.:.:......:|:.
 Worm    31 VVFTVSYDKG---------TGNQI---IEMEDTVQDV--KIQEAQQAPLRESEEVTEDPISVESS 81

  Fly   130 RTLSDYNIQKEST---IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPD 191
            ..:.:.|::...|   ::     ..|::|:|:. .|:|.||:...||::.:|||:|.:|..|.|:
 Worm    82 EVIGNLNVKVAETQQELH-----HEGIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPN 140

  Fly   192 QQRLIFAGKQLE---DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245
            .|:|:.....|:   |..||.|.:.:..|||.|.:.:...:.:||||.||||||:.:
 Worm   141 TQKLLLENWDLDLFSDHSTLFDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130 15/74 (20%)
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 15/78 (19%)
Ubl_ubiquitin 153..228 CDD:340501 26/77 (34%)
Ubl1_cv_Nsp3_N-like 229..296 CDD:475130 10/17 (59%)
F52C6.3NP_494127.2 Ubl1_cv_Nsp3_N-like 103..173 CDD:475130 25/70 (36%)

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