DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11700 and ubq-1

DIOPT Version :10

Sequence 1:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_741157.1 Gene:ubq-1 / 175840 WormBaseID:WBGene00006727 Length:838 Species:Caenorhabditis elegans


Alignment Length:296 Identity:265/296 - (89%)
Similarity:279/296 - (94%) Gaps:0/296 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 65
            ||||||||||||||||||.|||||||||||||||..||:.|||||.||.||:|||||||||||||
 Worm     1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly    66 TIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGR 130
            |::||||||||||||||||||||||||||.|||||||||||||||..||:.|||||.||.||:||
 Worm    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

  Fly   131 TLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRL 195
            ||||||||||||::||||||||||||||||||||||||||.||:||||||:|.||||||||||||
 Worm   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 195

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARIHD 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||.||||::|||:|.|
 Worm   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 260

  Fly   261 KDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
            |:|||||.||||||||||||||||||||||||||||
 Worm   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11700NP_572306.1 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130 64/74 (86%)
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 64/74 (86%)
Ubl_ubiquitin 153..228 CDD:340501 70/74 (95%)
Ubl1_cv_Nsp3_N-like 229..296 CDD:475130 59/66 (89%)
ubq-1NP_741157.1 Ubl_ubiquitin 1..76 CDD:340501 64/74 (86%)
Ubl_ubiquitin 77..152 CDD:340501 64/74 (86%)
Ubl_ubiquitin 153..228 CDD:340501 70/74 (95%)
Ubl_ubiquitin 229..304 CDD:340501 61/68 (90%)
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Ubl_ubiquitin 533..608 CDD:340501
Ubl_ubiquitin 609..684 CDD:340501
Ubl_ubiquitin 685..760 CDD:340501
Ubl_ubiquitin 761..836 CDD:340501
Blue background indicates that the domain is not in the aligned region.

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