DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11700 and Rps27a

DIOPT Version :9

Sequence 1:	NP_572306.1	Gene:	CG11700 / 31564	FlyBaseID:	FBgn0029856	Length:	301	Species:	Drosophila melanogaster
Sequence 2:	NP_001292372.1	Gene:	Rps27a / 100912032	RGDID:	6489478	Length:	156	Species:	Rattus norvegicus

Alignment Length:	106	Identity:	79/106 - (74%)
Similarity:	84/106 - (79%)	Gaps:	4/106 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly   153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
            |||||||||||||||||||||:||||||:|.||||||||||||||||||||||||||||||||||
  Rat     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly   218 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARI 258
            |||||||||||    .|....|:.|...:.....|.||..:
  Rat    66 TLHLVLRLRGG----AKKRKKKSYTTPKKNKHKRKKVKLAV 102

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11700	NP_572306.1	Ubiquitin	1..76	CDD:176398
		UBQ	1..72	CDD:214563
		Ubiquitin	77..152	CDD:176398
		UBQ	77..148	CDD:214563
		Ubiquitin	153..228	CDD:176398	71/74 (96%)
		UBQ	153..224	CDD:214563	67/70 (96%)
		UBQ	229..296	CDD:214563	6/30 (20%)
		UBQ	229..296	CDD:294102	6/30 (20%)
Rps27a	NP_001292372.1	Ubl_ubiquitin	1..76	CDD:340501	71/74 (96%)
Rps27a	NP_001292372.1	Ribosomal_S27	103..147	CDD:396259	79/106 (75%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D642374at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820