DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3566 and Cyb5d1

DIOPT Version :9

Sequence 1:NP_572304.5 Gene:CG3566 / 31562 FlyBaseID:FBgn0029854 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_001178819.1 Gene:Cyb5d1 / 363629 RGDID:1559567 Length:228 Species:Rattus norvegicus


Alignment Length:50 Identity:17/50 - (34%)
Similarity:27/50 - (54%) Gaps:2/50 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VNEHNKATDLWVVIDNKVYDVTKFRLEHPGG--EESLVDEAGRDATKAFN 57
            |.|||:..||||.....||::|....|..|.  .:.:::.||:|.:..|:
  Rat    25 VAEHNQPEDLWVSYLGFVYNLTPLVQEFKGDLLLKPILEVAGQDISHWFD 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3566NP_572304.5 Cyt-b5 4..77 CDD:278597 17/49 (35%)
Cyb5d1NP_001178819.1 Cyt-b5 19..>73 CDD:278597 16/47 (34%)
UBQ 143..199 CDD:214563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5274
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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