DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Josd and Josd2

DIOPT Version :10

Sequence 1:NP_572303.4 Gene:Josd / 31560 FlyBaseID:FBgn0029853 Length:221 Species:Drosophila melanogaster
Sequence 2:XP_006541134.1 Gene:Josd2 / 66124 MGIID:1913374 Length:227 Species:Mus musculus


Alignment Length:184 Identity:91/184 - (49%)
Similarity:112/184 - (60%) Gaps:13/184 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PHGIYHERQTRHLCGLHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIM 100
            |..:|||||...||.:|||||:.| ..:||:...|:.|..|.|.:.||||||.:|.|||||||||
Mouse    50 PPSVYHERQRLELCAVHALNNVLQ-EQLFSQEAADEICKRLAPDSRLNPHRSLLGTGNYDVNVIM 113

  Fly   101 YALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHMRHWLALRRLNGSYYN 165
            .|||.....|||:||||....|.|..:.|.|||:|:.:||| .:.||...|||:|||:::|.|||
Mouse   114 AALQGLGLAAVWWDRRRPLSQLALPQVLGLILNLPSPVSLG-LLSLPLRRRHWVALRQVDGIYYN 177

  Fly   166 LDSKLREPKCLGTEQQFLEFLATQL-QMDHELFLVLD---EETDCKDKSQQRWL 215
            ||||||.|:.||.|.....|||..| |...|:.||:.   ||..|       ||
Mouse   178 LDSKLRAPEALGDEDGVRTFLAAALAQGLCEVLLVVTKEVEEAGC-------WL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JosdNP_572303.4 Josephin 44..184 CDD:460444 73/139 (53%)
Josd2XP_006541134.1 Josephin 58..205 CDD:460444 77/148 (52%)

Return to query results.
Submit another query.