DRSC/TRiP Functional Genomics Resources

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Protein Alignment Josd and Josd2

DIOPT Version :10

Sequence 1:NP_572303.4 Gene:Josd / 31560 FlyBaseID:FBgn0029853 Length:221 Species:Drosophila melanogaster
Sequence 2:XP_006229058.1 Gene:Josd2 / 292876 RGDID:1307305 Length:227 Species:Rattus norvegicus


Alignment Length:181 Identity:90/181 - (49%)
Similarity:111/181 - (61%) Gaps:13/181 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IYHERQTRHLCGLHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIMYAL 103
            :|||||...||.:|||||:.| ..:||:...|:.|..|.|.:.||||||.:|.|||||||||.||
  Rat    53 VYHERQRLELCAVHALNNVLQ-EQLFSQEAADEICKRLAPDSRLNPHRSLLGTGNYDVNVIMAAL 116

  Fly   104 QQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHMRHWLALRRLNGSYYNLDS 168
            |.....|||:||||....|.|..:.|.|||:|:.:||| .:.||...|||:|||:::|.||||||
  Rat   117 QGLGLAAVWWDRRRPLSQLVLPQVLGLILNLPSPVSLG-LLSLPLRRRHWVALRQVDGIYYNLDS 180

  Fly   169 KLREPKCLGTEQQFLEFLATQL-QMDHELFLVLD---EETDCKDKSQQRWL 215
            |||.|:.||.|.....|||..| |...|:.||:.   ||..|       ||
  Rat   181 KLRAPEALGGEDGVRAFLAAALAQGLCEVLLVVTKEVEEAGC-------WL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JosdNP_572303.4 Josephin 44..184 CDD:460444 73/139 (53%)
Josd2XP_006229058.1 Josephin 58..205 CDD:460444 77/148 (52%)

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