DRSC/TRiP Functional Genomics Resources

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Protein Alignment Josd and josd-1

DIOPT Version :10

Sequence 1:NP_572303.4 Gene:Josd / 31560 FlyBaseID:FBgn0029853 Length:221 Species:Drosophila melanogaster
Sequence 2:NP_871685.1 Gene:josd-1 / 259492 WormBaseID:WBGene00022190 Length:173 Species:Caenorhabditis elegans


Alignment Length:167 Identity:58/167 - (34%)
Similarity:97/167 - (58%) Gaps:8/167 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IYHERQTRHLCGLHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIMYAL 103
            ||||:|....|.:|.:||:.|..: |..:::|:.|.......|.||||||||.||||.|::|.||
 Worm     7 IYHEKQRLQYCLIHTVNNILQKSE-FDPTKMDEICYAFNESKWFNPHRSWIGTGNYDANILMAAL 70

  Fly   104 QQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHMRHWLALRRLNGSYYNLDS 168
            |:.:.:.:|||:|.....:|:..:...:.|:|::..|..|     ..|||.|:.:.||.:||:||
 Worm    71 QKHDLKVMWFDKRVSVEKINMENVKAVVFNIPSRTLLTLY-----RGRHWFAVIQKNGIFYNVDS 130

  Fly   169 KLREPKCLGTEQQFLEFLATQLQMDHELFLVLDEETD 205
            |:::|:.:...::|::....  ..|.|:.||::...|
 Worm   131 KIKQPQVIEDIRKFVKIHVD--SPDSEVMLVVENSVD 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JosdNP_572303.4 Josephin 44..184 CDD:460444 49/139 (35%)
josd-1NP_871685.1 Josephin 12..140 CDD:460444 48/133 (36%)

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