DRSC/TRiP Functional Genomics Resources

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Protein Alignment HMGCR and HMG2

DIOPT Version :10

Sequence 1:XP_011541659.1 Gene:HMGCR / 3156 HGNCID:5006 Length:908 Species:Homo sapiens
Sequence 2:NP_013555.1 Gene:HMG2 / 851171 SGDID:S000004442 Length:1045 Species:Saccharomyces cerevisiae


Alignment Length:909 Identity:340/909 - (37%)
Similarity:485/909 - (53%) Gaps:140/909 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    69 ECPKFEEDVLSSDIIILTITRCIAILYIYFQFQNLRQLGSKYILGIAGLFTIFSSFVFSTVVIHF 133
            |..:|:..::.:..:.|..|.|..       |.::|::|||:.|..:.|.....:...|....|.
Yeast   183 EFDQFDLFIILAAYLTLFYTLCCL-------FNDMRKIGSKFWLSFSALSNSACALYLSLYTTHS 240

Human   134 LDKE---LTGLNEALPFFLLLIDLSRASTLAKFALSSNSQDEVRENIARGMAILGPTFTLDA-LV 194
            |.|:   |..|...|||.:::|.......||.|:|....:..:.:.|.....|....|...| |:
Yeast   241 LLKKPASLLSLVIGLPFIVVIIGFKHKVRLAAFSLQKFHRISIDKKITVSNIIYEAMFQEGAYLI 305

Human   195 ECLVIGVGTMSG----VRQLEIM---CCFGCMSVLANYFVFMTFFPACVSLVLELS--------R 244
            ...:..:.:..|    .|.|..:   |......::.:..:..||:.|.:|:.||::        |
Yeast   306 RDYLFYISSFIGCAIYARHLPGLVNFCILSTFMLVFDLLLSATFYSAILSMKLEINIIHRSTVIR 370

Human   245 ESREGRPIWQLSHFARVLEEEENKPNPVTQRVKMIMSLG-------LVLVHAHSRWIADPSPQNS 302
            ::.|...:  :...|.::.::|....|...|..:.:.||       |:|::.:    ......|:
Yeast   371 QTLEEDGV--VPTTADIIYKDETASEPHFLRSNVAIILGKASVIGLLLLINLY----VFTDKLNA 429

Human   303 TA------DTSKVSL---------GLDENVSKRIEPSVSLWQFY--------------------- 331
            |.      |::..||         |   |:|.::..||...|:|                     
Yeast   430 TILNTVYFDSTIYSLPNFINYKDIG---NLSNQVIISVLPKQYYTPLKKYHQIEDSVLLIIDSVS 491

Human   332 -------LSKMISMDIEQVITLSLALLLAVK----YIFFEQTETESTLSLKNPITSPVVTQKKVP 385
                   :||::.......|::::.||.|.|    |:.|:..        .|.|...||.||.. 
Yeast   492 NAIRDQFISKLLFFAFAVSISINVYLLNAAKIHTGYMNFQPQ--------SNKIDDLVVQQKSA- 547

Human   386 DNCCRREPMLVRNNQKCDSVEEETGINRERKVEVIKPLVAETDTPNRATFVVGNSSLLDTSSVLV 450
                              ::|    .:..|.:    |..:..:||..|..::.:..:.:...|..
Yeast   548 ------------------TIE----FSETRSM----PASSGLETPVTAKDIIISEEIQNNECVYA 586

Human   451 TQEPEIELPREP-RPNEECLQILGNAEKGAKFLSDAEIIQLVNAKHIPAYKLETLMETHERGVSI 514
            ....:     || ||....::::  .::..|.:::.|:..||....:|.|.||..:|...|.|.:
Yeast   587 LSSQD-----EPIRPLSNLVELM--EKEQLKNMNNTEVSNLVVNGKLPLYSLEKKLEDTTRAVLV 644

Human   515 RRQLLSKKLSEPSSL-QYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDEKEFQVPMATT 578
            ||:.||.....|..: :.||:|:|:|..|.|||||||||||||||||.|||.:|...:.:|||||
Yeast   645 RRKALSTLAESPILVSEKLPFRNYDYDRVFGACCENVIGYMPIPVGVIGPLIIDGTSYHIPMATT 709

Human   579 EGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFD 643
            |||||||..|||:||..||||::.:..||||||||||.|....|...|.||::.||...||:||:
Yeast   710 EGCLVASAMRGCKAINAGGGATTVLTKDGMTRGPVVRFPTLIRSGACKIWLDSEEGQNSIKKAFN 774

Human   644 STSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKL-HEY-FPEMQILAVSGN 706
            |||||||||.:.|.:||..|::||::.:||||||||||||.|.:|.:: .|| :.:|::::||||
Yeast   775 STSRFARLQHIQTCLAGDLLFMRFRTTTGDAMGMNMISKGVEYSLKQMVEEYGWEDMEVVSVSGN 839

Human   707 YCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGSAMAGSIGGYNA 771
            |||||||||||||||||||||.||.||..||:.|||:...|::|:||:|||||||||||:||:||
Yeast   840 YCTDKKPAAINWIEGRGKSVVAEATIPGDVVKSVLKSDVSALVELNISKNLVGSAMAGSVGGFNA 904

Human   772 HAANIVTAIYIACGQDAAQNVGSSNCITLM-EASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQ 835
            ||||:|||:::|.|||.||||.|||||||| |..|    ||.||.:|||||:||:||||.|.||.
Yeast   905 HAANLVTALFLALGQDPAQNVESSNCITLMKEVDG----DLRISVSMPSIEVGTIGGGTVLEPQG 965

Human   836 ACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLMAALAAGHLVKSHMIHNRSKINLQDL 899
            |.|.:|||:|.....||.||||||||:...|:||||||.:||||||||:|||.|||......:|
Yeast   966 AMLDLLGVRGPHPTEPGANARQLARIIACAVLAGELSLCSALAAGHLVQSHMTHNRKTNKANEL 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HMGCRXP_011541659.1 2A060605 21..908 CDD:273339 340/909 (37%)
HMG2NP_013555.1 HPIH 10..159 CDD:404239
2A060605 195..1030 CDD:273339 338/897 (38%)
HMG_CoA_R_NADP 612..1021 CDD:129624 247/412 (60%)
Blue background indicates that the domain is not in the aligned region.

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