DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spx and MIP6

DIOPT Version :10

Sequence 1:NP_511058.1 Gene:Spx / 31558 FlyBaseID:FBgn0015818 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_011879.1 Gene:MIP6 / 856408 SGDID:S000001057 Length:659 Species:Saccharomyces cerevisiae


Alignment Length:235 Identity:50/235 - (21%)
Similarity:99/235 - (42%) Gaps:26/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYG 70
            |.:.::..:::.|.|...|:|.:|.::|.:.....:..:.:|.:|:...|||::.|..:.||:..
Yeast   104 ITKTSKTNSLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESA 168

  Fly    71 IKIMNMIKLYGKPIRV---NKASAHQKNLDVGANIFIGNLDVE---VDEKLLYDTFSAFGVILQT 129
            .|..|....:|:.:::   .|.:..:||  :|.|:|..||.:|   :..:..|.....:|.:|..
Yeast   169 RKEFNYTVFFGQEVKIMPSMKNTLFRKN--IGTNVFFSNLPLENPQLTTRSFYLIMIEYGNVLSC 231

  Fly   130 PKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKD--------HKGER 186
            ....|       |:..|:.|.:..::...:...|.|......|.....|.|:        .:.:.
Yeast   232 LLERR-------KNIGFVYFDNDISARNVIKKYNNQEFFGNKIICGLHFDKEVRTRPEFTKRKKM 289

  Fly   187 HGS---AAERLLAAQNPSTHADRPHQLFADAPVQTMMPQM 223
            .||   ..:.|||:.|.|.:|.....|..:.|..|...::
Yeast   290 IGSDIVIEDELLASNNLSDNARSKTILVKNLPSDTTQEEV 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpxNP_511058.1 RRM1_SF3B4 15..88 CDD:409771 17/75 (23%)
RRM2_SF3B4 99..181 CDD:409772 17/84 (20%)
MIP6NP_011879.1 RRM1_PES4_MIP6 111..190 CDD:410180 17/78 (22%)
RRM2_PES4_MIP6 200..275 CDD:410181 16/81 (20%)
RRM3_PES4_MIP6 313..385 CDD:410182 3/17 (18%)
RRM4_PES4_MIP6 400..478 CDD:410183
Blue background indicates that the domain is not in the aligned region.

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