Protein Alignment Spx and shep

DIOPT Version :9

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_001246636.1
• Gene: shep / 38605
• FlyBaseID: FBgn0052423
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 354
• Identity: 85/354 - (24%)
• Similarity: 132/354 - (37%)
• Gaps: 54/354 - (15%)

  Fly     4 GPIAERNQD-------ATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEF 61
            |.:..:||.       ..:|..||....::..|..:..|.|.:::.....|:.|...:|||||:|
  Fly   227 GTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDF 291

  Fly    62 LSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
            .....|:..:|     .|.||.::...|...:::   ..|::|.||.....|..|....|.:|.:
  Fly   292 EQPAFAECAVK-----GLQGKGVQAQMAKQQEQD---PTNLYIANLPPHFKETDLEAMLSKYGQV 348

  Fly   127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYL--CNRPISVSYA---------FKK 180
            :.| :|:||.:. .||...|....|.|..:..:...||..:  ...|:.|.:|         ||.
  Fly   349 VST-RILRDQQM-NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKT 411

  Fly   181 DHKGER--HGSAAERLLAAQNPS-----------THADRPHQLFADAPVQTMMPQMPGQIPAQMP 232
            .....|  ...:||.:..|.:|:           |....|:..|:       .||:.|...|  .
  Fly   412 PDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPIGVPYSRFS-------APQVGGYPVA--G 467

  Fly   233 GQMMPPPMMAPPPPVVPVSNNNMGMLAPPP-PVPQPAPFPAT-IPPPPLPPMTGGQPPLPPAMGI 295
            .|.:|..||.........|...|.|.|.|| .|....|.... :.|..:..|..|...:|....:
  Fly   468 SQWIPGYMMTQVDDQTSYSPQYMQMAAAPPLGVTSYKPEAVNQVQPRGISMMVSGDTGVPYGTMM 532

  Fly   296 PPPPRMMQPNAWAPPGMP--APPPRPPPT 322
            |....:...|::..|..|  ||||...||
  Fly   533 PQLATLQIGNSYISPTYPYYAPPPTIIPT 561

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:240780	19/72 (26%)
		RRM2_SF3B4	99..181	CDD:240781	24/92 (26%)
shep	NP_001246636.1	RRM1_MSSP	243..313	CDD:240689	19/74 (26%)
		RRM2_MSSP	322..400	CDD:240690	21/79 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439592
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24012
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940