Protein Alignment Spx and pAbp

DIOPT Version :10

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Alignment Length: 182
• Identity: 63/182 - (34%)
• Similarity: 103/182 - (56%)
• Gaps: 5/182 - (2%)

  Fly    13 ATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYGIKIMNMI 77
            |::|.|.|...|:|:.|::.|..||||:::.:.:|.:|:...||.:|.|....||:..:..||..
  Fly     2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFD 66

  Fly    78 KLYGKPIRV--NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGK 140
            .:..||||:  ::.....:...|| |:||.|||..:|.|.:||||||||.||.. |:..| |.|.
  Fly    67 LVRNKPIRIMWSQRDPSLRRSGVG-NVFIKNLDRAIDNKAIYDTFSAFGNILSC-KVATD-EKGN 128

  Fly   141 SKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAE 192
            ||.:.|::|.:.||::.::|.:||..|..:.:.|.....:..:.:..|..|:
  Fly   129 SKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAK 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:409771	25/74 (34%)
		RRM2_SF3B4	99..181	CDD:409772	34/81 (42%)
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	63/182 (35%)