Protein Alignment Spx and fne

DIOPT Version :9

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Alignment Length: 234
• Identity: 58/234 - (24%)
• Similarity: 100/234 - (42%)
• Gaps: 57/234 - (24%)

  Fly     3 AGPIAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDA 67
            |.|.:|..:.|.:|..||...:|:..|..:|...|.::...:..|.::.:.:|.||:.|....:|
  Fly   120 ARPSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEA 184

  Fly    68 DYGIKIMN--MIKLYGKPIRVN-----------------------KASAHQKNL----------- 96
            :..|:.:|  ..|.|.:||.|.                       :|:|..:.|
  Fly   185 ERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAGALPSAGRIR 249

  Fly    97 ------DVGAN--------------IFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKS 141
                  |:.||              ||:.||..|.:|.:|:..|..||.: |:.|::||.:|.|.
  Fly   250 YSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAV-QSVKVIRDLQTSKC 313

  Fly   142 KSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKK 180
            |.|.|:...:::.:..|:.::||..|.||.:.||:...|
  Fly   314 KGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:240780	20/97 (21%)
		RRM2_SF3B4	99..181	CDD:240781	30/96 (31%)
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	58/234 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439634
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840