Protein Alignment Spx and pabpc4

DIOPT Version :10

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_958453.1
• Gene: pabpc4 / 321035
• ZFINID: ZDB-GENE-030131-9663
• Length: 637
• Species: Danio rerio
• Alignment Length: 183
• Identity: 70/183 - (38%)
• Similarity: 109/183 - (59%)
• Gaps: 7/183 - (3%)

  Fly    13 ATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYGIKIMNMI 77
            |::|.|.|...::|.:|:|.|..||||:::.:.:|.:|:...||.:|.|....||:..:..||..
Zfish    12 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFD 76

  Fly    78 KLYGKPIRV--NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGK 140
            .:.|||||:  ::.....:...|| |:||.|||..:|.|.|||||||||.||.. |::.| |.|
Zfish    77 VVKGKPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC-KVVCD-ENG- 137

  Fly   141 SKSFAFINFASFEASDAAMDAMNGQYLCNRPISVS-YAFKKDHKGERHGSAAE 192
            ||.:||::|.:.:|:|.|::.|||..|.:|.:.|. :..:|:.:.|....|.|
Zfish   138 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGAKAKE 190

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:409771	26/74 (35%)
		RRM2_SF3B4	99..181	CDD:409772	38/82 (46%)
pabpc4	NP_958453.1	PABP-1234	12..614	CDD:130689	70/183 (38%)