Protein Alignment Spx and ssx

DIOPT Version :10

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 260
• Identity: 63/260 - (24%)
• Similarity: 108/260 - (41%)
• Gaps: 53/260 - (20%)

  Fly     8 ERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYGIK 72
            :|.....:....|...:::..|:.||...||:....:.:|..|....|||||::.:|.|::..|:
  Fly    88 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQ 152

  Fly    73 IMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPE 137
            .:|...:..|.::|:.|....:::. ..|:::.||...:::.:|...||.:|:|:|. .|:||..
  Fly   153 KLNGFYVRNKRLKVSYARPGGQSIK-DTNLYVINLSRNINDDMLDRIFSPYGLIVQR-NILRDKL 215

  Fly   138 TGKSKSFAFINFASFEASDAAMDAMN------GQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
            ||:.:..||:.:...|.:..|:.|:|      |    ::||.|..|       |.||.|......
  Fly   216 TGRPRGVAFVRYNKREEAQEAIKALNNTVPEGG----SQPIWVRLA-------EEHGKAKAAQFM 269

  Fly   197 AQ---------------------NPSTHAD--------RPHQLFADAPVQTMMPQMPGQIPAQMP 232
            ||                     :|..|.:        .||.     |.....||.|.|.|...|
  Fly   270 AQIGGGNGGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHM-----PPHHHQPQHPHQHPQHHP 329

  Fly   233  232
              Fly   330  329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:409771	19/72 (26%)
		RRM2_SF3B4	99..181	CDD:409772	25/87 (29%)
ssx	NP_569908.1	sex-lethal	<76..272	CDD:273740	51/196 (26%)