Protein Alignment Spx and Pabpc1l

DIOPT Version :10

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: XP_063141283.1
• Gene: Pabpc1l / 296351
• RGDID: 1563142
• Length: 655
• Species: Rattus norvegicus
• Alignment Length: 193
• Identity: 65/193 - (33%)
• Similarity: 102/193 - (52%)
• Gaps: 17/193 - (8%)

  Fly    13 ATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYGIKIMNMI 77
            :::|.|.|...|:|.:|:|:|...|.::::.:.:|..|:...||.::.|....||:..:..||..
  Rat    11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFE 75

  Fly    78 KLYGKPIRVNKASAHQKNLDVG------ANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDP 136
            .:.|:|||:  ..:|:   |.|      .||||.||:..:|.|.||||||.||.||.:..:..
  Rat    76 MIKGQPIRI--MWSHR---DPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN-- 133

  Fly   137 ETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQN 199
            |.| |:.|.|::|.:.||:..|::.|||..|.:|.:.|.: ||...|  |......|.|...|
  Rat   134 EHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGH-FKSRQK--REAELGARALGFTN 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:409771	22/72 (31%)
		RRM2_SF3B4	99..181	CDD:409772	36/87 (41%)
Pabpc1l	XP_063141283.1	None