DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spx and sap49

DIOPT Version :9

Sequence 1:NP_511058.1 Gene:Spx / 31558 FlyBaseID:FBgn0015818 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_594001.2 Gene:sap49 / 2542426 PomBaseID:SPAC31G5.01 Length:335 Species:Schizosaccharomyces pombe


Alignment Length:353 Identity:156/353 - (44%)
Similarity:213/353 - (60%) Gaps:44/353 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYGIK 72
            :||||||||.|.||:||::::|:||.:|||||||:|:|:|||...|.|:||.|||.|:|.:|..:
pombe     6 DRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQ 70

  Fly    73 IMNMIKLYGKPIRVNKASAHQ-KNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDP 136
            |:|.:||:|||||||:||..: .|..:|||:|:||||..|||::|||||||.|.:::.|::.|| 
pombe    71 ILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARD- 134

  Fly   137 ETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQNPS 201
            |.|:||.:.|:::.|||.:|||::|||.|:|.|:||:||||||::.||||||..|||.|||    
pombe   135 ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHGDIAERKLAA---- 195

  Fly   202 THADRPHQLFADAPVQTMMPQMPGQIPAQMPGQMMPPPMMA---PPPPVVPVSNNNMGMLAPPPP 263
              |.:.::: |..|..|:.|......||.......|..:.|   ||.|.||:......:  ||..
pombe   196 --AAKKNKV-AVTPQSTLPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAV--PPLS 255

  Fly   264 VPQPAPFPATIPPPPLP-------PMTGGQPPLPPAMGIPPPPRMM----QPNAWAPPGMPAPPP 317
            :|...||.|....|.:|       ||..|..||.|    ||||.|:    .|.|...||.|.   
pombe   256 IPNVLPFTAAQHFPGMPAMPMMNVPMGPGGAPLVP----PPPPGMVMASPSPAAATIPGAPV--- 313

  Fly   318 RPPPTNWRPPPVPFPPTPYARPYQPDGY 345
                    .|.:||..|..|:    :||
pombe   314 --------MPNIPFYQTINAQ----NGY 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpxNP_511058.1 RRM1_SF3B4 15..88 CDD:240780 42/72 (58%)
RRM2_SF3B4 99..181 CDD:240781 47/81 (58%)
sap49NP_594001.2 RRM1_SF3B4 13..86 CDD:240780 42/72 (58%)
RRM2_SF3B4 98..179 CDD:240781 47/81 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I1861
eggNOG 1 0.900 - - E1_KOG0131
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 267 1.000 Inparanoid score I725
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004820
OrthoInspector 1 1.000 - - oto101242
orthoMCL 1 0.900 - - OOG6_102421
Panther 1 1.100 - - LDO PTHR24012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1284
SonicParanoid 1 1.000 - - X3402
TreeFam 1 0.960 - -
1211.850

Return to query results.
Submit another query.