Protein Alignment Spx and Pabpc4

DIOPT Version :10

• Sequence 1: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_570951.2
• Gene: Pabpc4 / 230721
• MGIID: 2385206
• Length: 660
• Species: Mus musculus
• Alignment Length: 183
• Identity: 72/183 - (39%)
• Similarity: 109/183 - (59%)
• Gaps: 7/183 - (3%)

  Fly    13 ATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYGIKIMNMI 77
            |::|.|.|...|:|.:|:|.|..||||:::.:.:|.:|:...||.:|.|....||:..:..||..
Mouse    11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFD 75

  Fly    78 KLYGKPIRV--NKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGK 140
            .:.|||||:  ::.....:...|| |:||.|||..:|.|.|||||||||.||.. |::.| |.|
Mouse    76 VMKGKPIRIMWSQRDPSLRKSGVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC-KVVCD-ENG- 136

  Fly   141 SKSFAFINFASFEASDAAMDAMNGQYLCNRPISVS-YAFKKDHKGERHGSAAE 192
            ||.:||::|.:.||:|.|::.|||..|.:|.:.|. :..:|:.:.|....|.|
Mouse   137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKE 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:409771	27/74 (36%)
		RRM2_SF3B4	99..181	CDD:409772	39/82 (48%)
Pabpc4	NP_570951.2	PABP-1234	11..640	CDD:130689	72/183 (39%)