DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spx and Sf3b4

DIOPT Version :10

Sequence 1:NP_511058.1 Gene:Spx / 31558 FlyBaseID:FBgn0015818 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_694693.1 Gene:Sf3b4 / 107701 MGIID:109580 Length:424 Species:Mus musculus


Alignment Length:418 Identity:250/418 - (59%)
Similarity:275/418 - (65%) Gaps:81/418 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAGPIAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEE 65
            ||||||:|||||||:|.||||:||||.||||||:|||||||.||||||||..|||||||||||||
Mouse     1 MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

  Fly    66 DADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTP 130
            ||||.||||||||||||||||||||||.|||||||||||||||.|:|||||||||||||||||||
Mouse    66 DADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTP 130

  Fly   131 KIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLL 195
            ||||||:||.||.:||||||||:|||||::||||||||||||:||||||||.|||||||||||||
Mouse   131 KIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLL 195

  Fly   196 AAQNPSTHADRPHQLFADAPVQTMMPQMPGQIPAQMPGQMMPPPMMAP----PPPVVPVSNNNMG 256
            |||||.:.||||||||||||..   |..|..:.:.: |..:|||.|.|    ||||.|......|
Mouse   196 AAQNPLSQADRPHQLFADAPPP---PSAPNPVVSSL-GSGLPPPGMPPPGSFPPPVPPPGALPPG 256

  Fly   257 M--LAPPPPVP------------------------QPAPF-PATIPPPPL--------------- 279
            :  ..||||:|                        .|.|| |..:|.|.:               
Mouse   257 IPPAMPPPPMPPGAGGHGPPAAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGH 321

  Fly   280 ----PPMTGGQPPL----------PPAMGIPP--PP---RMMQPNAWAPPGMPAP---------- 315
                ||.:|||||.          ||.||:||  ||   .|..|....|.||..|          
Mouse   322 PHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYT 386

  Fly   316 -PPRPPPTNWRPPPVPFPPTPYARPYQP 342
             ||||||..::..|:| ||.|..||..|
Mouse   387 GPPRPPPYGYQRGPLP-PPRPTPRPPVP 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpxNP_511058.1 RRM1_SF3B4 15..88 CDD:409771 63/72 (88%)
RRM2_SF3B4 99..181 CDD:409772 71/81 (88%)
Sf3b4NP_694693.1 RRM1_SF3B4 15..88 CDD:409771 63/72 (88%)
RRM2_SF3B4 99..181 CDD:409772 71/81 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..424 69/212 (33%)

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