DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and AT1G12310

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_172695.1 Gene:AT1G12310 / 837785 AraportID:AT1G12310 Length:148 Species:Arabidopsis thaliana


Alignment Length:133 Identity:41/133 - (30%)
Similarity:70/133 - (52%) Gaps:5/133 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMM--NEAPGPINFTMFLTLFGE 94
            |::..||||.:.|.:.||.:...:|..::.|||.|||...|..::  .....|.:|..||.|..:
plant    10 QVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLSSPFDFNRFLDLMAK 74

  Fly    95 RLQGTDPED-VIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPI-KNGLFDY 157
            .|: |:|.| .:::||...|:|..|.:....||.:||::|::....:.||..:|..: .:|...|
plant    75 HLK-TEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRY 138

  Fly   158 LEF 160
            .:|
plant   139 EDF 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 41/133 (31%)
AT1G12310NP_172695.1 PTZ00184 4..148 CDD:185504 41/133 (31%)

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