DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and CML11

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_188933.1 Gene:CML11 / 821865 AraportID:AT3G22930 Length:173 Species:Arabidopsis thaliana


Alignment Length:140 Identity:53/140 - (37%)
Similarity:85/140 - (60%) Gaps:5/140 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNE----APGPINFTMFLT 90
            |.||.||||||.:.|::.||.:..::|..::.||.:|||:..|..|:.|    ..|.|.|:.||.
plant    30 QEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGTIEFSEFLN 94

  Fly    91 LFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-NGL 154
            |...:||.||.::.:|.||..||::..|.:....||.::..:|::.|||:||:|.:||.:. :|.
plant    95 LMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVDQMIKEADLDGDGQ 159

  Fly   155 FDYLEFTRIL 164
            .:|.||.|::
plant   160 VNYDEFVRMM 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 53/138 (38%)
CML11NP_188933.1 PTZ00184 27..170 CDD:185504 53/140 (38%)

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