DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and AT2G41090

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_181642.1 Gene:AT2G41090 / 818708 AraportID:AT2G41090 Length:191 Species:Arabidopsis thaliana


Alignment Length:142 Identity:46/142 - (32%)
Similarity:76/142 - (53%) Gaps:8/142 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMMNEA----PGPINFTMF 88
            |.:.||:||:|.|::.|:|.||.:..|:...::.|||.|.|...|...:|::    .|.||||.|
plant     5 FTRQQISEFREQFSVYDKNGDGHITTEEFGAVMRSLGLNLTQAELQEEINDSDLDGDGTINFTEF 69

  Fly    89 LTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-N 152
            |....   :.|..|..:|..|..||.:..|.:....:|.:.|.:..:.|||::||:.:.|.:. :
plant    70 LCAMA---KDTYSEKDLKKDFRLFDIDKNGFISAAEMRYVRTILRWKQTDEEIDEIIKAADVDGD 131

  Fly   153 GLFDYLEFTRIL 164
            |..:|.||.|::
plant   132 GQINYREFARLM 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 46/140 (33%)
AT2G41090NP_181642.1 PTZ00184 1..146 CDD:185504 46/142 (32%)

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