DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and CALM3

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_005175.2 Gene:CALM3 / 808 HGNCID:1449 Length:149 Species:Homo sapiens


Alignment Length:57 Identity:12/57 - (21%)
Similarity:20/57 - (35%) Gaps:12/57 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 CHEFPLMTL---------IMFLPSYLHDVHHYHSTENGILSALPTVSLWFAKIGSSY 340
            |.|..|.|:         :.::.:.:.....:...:.||.||.|.   ||......|
Human    32 CRELLLGTMYDFSLEKKALFWVEAAIRGSCSHQCNDLGIASAPPA---WFLLASPKY 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504
CALM3NP_005175.2 PTZ00184 1..149 CDD:185504 12/57 (21%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000269|PubMed:27876793 77..149 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.

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