DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and myl6

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_005166134.1 Gene:myl6 / 798632 ZFINID:ZDB-GENE-041010-28 Length:164 Species:Danio rerio


Alignment Length:139 Identity:42/139 - (30%)
Similarity:70/139 - (50%) Gaps:10/139 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTD-DYLDGMMNEAPGPIN-----FT 86
            |.:.||.||||||.:.|:..||.:......|::.:||:||.: :.|..:.|.:...:|     |.
Zfish     4 FTEDQICEFKEAFLLFDRTGDGKIMYNQCGDVMRALGQNPVNAEVLKVLGNPSNEDMNMKMLDFE 68

  Fly    87 MFLTLFGERLQGTDP---EDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREA 148
            .||.:.....:..|.   ||.:: ....||:|..|.:....||.:|||:|::.|:|:|:.:....
Zfish    69 QFLPMLQAIAKNKDQGSFEDFVE-GLRVFDKEGNGTVMGAELRHVLTTLGEKMTEEEVETLLAGH 132

  Fly   149 PIKNGLFDY 157
            ...||..:|
Zfish   133 EDANGCINY 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 42/139 (30%)
myl6XP_005166134.1 PTZ00184 5..142 CDD:185504 41/138 (30%)

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