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Protein Alignment sqh and Efcab11
DIOPT Version :9
Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_084448.1 |
Gene: | Efcab11 / 78767 |
MGIID: | 1926017 |
Length: | 162 |
Species: | Mus musculus |
Alignment Length: | 170 |
Identity: | 32/170 - (18%) |
Similarity: | 66/170 - (38%) |
Gaps: | 23/170 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASL-GKN 66
:|..||..:.:::| ::.:.|...|::..|::.:||....:..| |..
Mouse 8 ARPRAGEASASERR------------------KWVKVFKACDEDNKGYLSREDFKVAIVMLFGYK 54
Fly 67 PTDDYLDGMM---NEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLREL 128
|:....|.:| |.....::...||:....:.:.....:.|:..|..||....|.|..:..:..
Mouse 55 PSKIEADAVMSSVNPNTSGVSLEGFLSAVKRKKEARLYRNEIRQIFTAFDVHYRGFLTLEDFKRA 119
Fly 129 LTTMGDRFTDEDVDEMYREA-PIKNGLFDYLEFTRILKHG 167
.:.:..:.....|.|::||| ...:|...:.:|...:.||
Mouse 120 FSRVAPKLPARTVLEVFREADQDSDGHVSFRDFEYAMNHG 159
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
29/158 (18%) |
Efcab11 | NP_084448.1 |
FRQ1 |
14..152 |
CDD:227455 |
26/155 (17%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1435392at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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