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Protein Alignment sqh and myl2b
DIOPT Version :9
Sequence 1: | NP_001284928.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001035134.1 |
Gene: | myl2b / 677750 |
ZFINID: | ZDB-GENE-060331-137 |
Length: | 168 |
Species: | Danio rerio |
Alignment Length: | 163 |
Identity: | 86/163 - (52%) |
Similarity: | 115/163 - (70%) |
Gaps: | 3/163 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 KKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPTDDYLDGMMN 77
||||:.|.||||:||:||||.||||||.::|||||||::|.||.|..|:||: |...:.||.|:.
Zfish 7 KKRAEGANSNVFSMFEQAQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRLNVKQEELDEMLK 71
Fly 78 EAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVD 142
|||||||||:|||:|||:|:|.|.|:.|.|||..||.|..|.|.:|.|..:|||..|||:.|:::
Zfish 72 EAPGPINFTVFLTMFGEKLKGADAEETILNAFKVFDPEGKGTLRKDFLSRMLTTQADRFSPEEME 136
Fly 143 EMYRE-APIKNGLFDYLEFTRILKHGAKDKDEQ 174
:|:.. .|...|..||.....|:.|| ::||::
Zfish 137 QMFSAFPPDAAGNLDYKNLVYIITHG-EEKDQE 168
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sqh | NP_001284928.1 |
FRQ1 |
15..170 |
CDD:227455 |
83/156 (53%) |
myl2b | NP_001035134.1 |
FRQ1 |
15..163 |
CDD:227455 |
79/148 (53%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
102 |
1.000 |
Domainoid score |
I6778 |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0031 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1435392at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000218 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23049 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X162 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.920 |
|
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