Protein Alignment sqh and cmlc1

DIOPT Version :10

• Sequence 1: NP_511057.1
• Gene: sqh / 31554
• FlyBaseID: FBgn0003514
• Length: 174
• Species: Drosophila melanogaster
• Sequence 2: NP_571767.2
• Gene: cmlc1 / 64671
• ZFINID: ZDB-GENE-030522-1
• Length: 196
• Species: Danio rerio
• Alignment Length: 166
• Identity: 47/166 - (28%)
• Similarity: 76/166 - (45%)
• Gaps: 17/166 - (10%)

  Fly    13 TKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDG--FVEKEDLHDMLASLGKNPTD-DYLDG 74
            |.|..:....:|...|...||.||::||.:.|:...|  .:......|::.:||.|||: |.|..
Zfish    32 TPKEPEVDLKSVPLDFSPDQIEEFRDAFTLFDETPTGEMKIRYAQCGDVMRALGHNPTNADVLTV 96

  Fly    75 MMNEAPGPIN-----FTMFLTLFGE----RLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLT 130
            :.......:|     |..||.:...    :.|||. ||.:: ....||:|..|.:....||.:|.
Zfish    97 LGKPKAEEMNTKYLDFETFLPMLQHISRAKDQGTF-EDFVE-GLRVFDKEGNGTVMGAELRHVLA 159

  Fly   131 TMGDRFTDEDVDEMYREAPIKNGLFDYLEFTRILKH 166
            |:|::.|:::||.:.......||..:|..|   :||
Zfish   160 TLGEKMTEDEVDRLMAGQEDANGCINYTSF---IKH 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqh	NP_511057.1	PTZ00184	27..164	CDD:185504	42/148 (28%)
cmlc1	NP_571767.2	PTZ00184	48..195	CDD:185504	43/150 (29%)