DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and mylz3

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_571694.1 Gene:mylz3 / 58143 ZFINID:ZDB-GENE-000322-6 Length:151 Species:Danio rerio


Alignment Length:147 Identity:42/147 - (28%)
Similarity:71/147 - (48%) Gaps:17/147 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPT---------DDYLDGMMNEAPGPI 83
            |...||.:|||||.:.|:..|..|....:.|::.:||:|||         |...|.|.|:.   |
Zfish     5 FTADQIEDFKEAFGLFDRVGDSKVAYNQVADIMRALGQNPTNKDVKKILGDPSADDMANKR---I 66

  Fly    84 NFTMFLTLF---GERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMY 145
            :|..||.:.   ....:||..:.|  .....||:|..|.:....||.:|:|:|::.::.::|.:.
Zfish    67 DFEAFLPMLKTVDANQKGTYDDYV--EGLRVFDKEGNGTVMGAELRIVLSTLGEKMSEPEIDALM 129

  Fly   146 REAPIKNGLFDYLEFTR 162
            :....:||:..|..|.:
Zfish   130 QGQEDENGMVHYEAFVK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 42/147 (29%)
mylz3NP_571694.1 PTZ00184 1..150 CDD:185504 42/147 (29%)

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