DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and myl10

DIOPT Version :9

Sequence 1:NP_001284928.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001017871.1 Gene:myl10 / 550569 ZFINID:ZDB-GENE-050417-421 Length:167 Species:Danio rerio


Alignment Length:162 Identity:78/162 - (48%)
Similarity:116/162 - (71%) Gaps:3/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGK-NPTDDYLDGMMNE 78
            |:.:.|:||||:||:|:||.||||||.::|||||||::|.||.|..|:||: |..:|.||.|:.|
Zfish     7 KKKEAASSNVFSMFEQSQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRLNVGNDELDEMLKE 71

  Fly    79 APGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDE 143
            |.||||||:||::|||:|:|||||:.|.|||..||.|..|:|..:.::..|.:..|:||:.:|::
Zfish    72 ASGPINFTIFLSMFGEKLKGTDPEETILNAFKIFDPEGTGILKGEEIKYHLMSQVDKFTEAEVNQ 136

  Fly   144 MYREAPIK-NGLFDYLEFTRILKHGAKDKDEQ 174
            |:...|:. .|..||.....::.|| :||:::
Zfish   137 MFTNFPLDVAGNLDYKNLCYVITHG-EDKEQE 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_001284928.1 FRQ1 15..170 CDD:227455 76/156 (49%)
myl10NP_001017871.1 FRQ1 13..163 CDD:227455 74/150 (49%)
EFh 27..85 CDD:298682 35/57 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6778
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 1 1.000 - - FOG0000218
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23049
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X162
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

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