DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and cetn2

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001017149.1 Gene:cetn2 / 549903 XenbaseID:XB-GENE-967617 Length:172 Species:Xenopus tropicalis


Alignment Length:141 Identity:39/141 - (27%)
Similarity:73/141 - (51%) Gaps:5/141 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDDYLDGMM----NEAPGPINFTMFLT 90
            :.|..|.:|||::.|.:..|.::.::|...:.:||..|..:.:..|:    .|..|.|:|..|::
 Frog    27 EEQKQEIREAFDLFDTDGAGTIDVKELKVAMRALGFEPKKEEIKKMIADIDKEGTGKISFGDFMS 91

  Fly    91 LFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPIK-NGL 154
            ...:::...|.::.|..||..||::..|.:....|:.:...:|:..|||::.||..||... :|.
 Frog    92 AMTQKMAEKDSKEEIMKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGE 156

  Fly   155 FDYLEFTRILK 165
            .:..||.||:|
 Frog   157 VNEQEFLRIMK 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 37/138 (27%)
cetn2NP_001017149.1 PTZ00183 16..172 CDD:185503 39/141 (28%)

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