DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqh and calml4

DIOPT Version :10

Sequence 1:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001011117.1 Gene:calml4 / 496530 XenbaseID:XB-GENE-5936220 Length:153 Species:Xenopus tropicalis


Alignment Length:138 Identity:44/138 - (31%)
Similarity:71/138 - (51%) Gaps:5/138 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKNPTDD----YLDGMMNEAPGPINFTMFLT 90
            |..|.:|||.|::.|:...|.:...||..::..||..||..    :|........|.::|:.|||
 Frog     7 QDAIQKFKECFSLYDKKGKGKIPAGDLLTVMRCLGTCPTPGEVTRHLQVHKIGKDGEVDFSTFLT 71

  Fly    91 LFGERLQGTDPEDVIKNAFGCFDEENMGVLPEDRLRELLTTMGDRFTDEDVDEMYREAPI-KNGL 154
            :...:.:..|||:.|..|....|::..||:|...||..||.||::.|.|:||::.:...: .:|:
 Frog    72 IMYRQQKQEDPENEIMVAMLMSDKQKKGVIPLKELRAKLTQMGEKLTPEEVDDLLKGVKVGPDGM 136

  Fly   155 FDYLEFTR 162
            ..|.||.|
 Frog   137 VKYEEFVR 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 44/138 (32%)
calml4NP_001011117.1 PTZ00184 1..144 CDD:185504 43/136 (32%)

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